Stem-loop mdo-mir-148

Accession

MI0012493

Description

Monodelphis domestica mdo-mir-148 precursor miRNA

Gene family

MIPF0000056; mir-148

Sequence

90678 reads, 1947 reads per million, 5 experiments

gaggcAAAGUUCUGGGACACUCAGACUcugauuaggauagaagUCAGUGCACUACAGAACUUUGUcuc
(((((((((((((((..((((..(((((((.......))).))))))))..)..))))))))))))))

Structure

              -- GA    CA    -   au 
gaggcAAAGUUCUG  G  CACU  GACU cug  u
||||||||||||||  |  ||||  |||| |||  a
cucUGUUUCAAGAC  C  GUGA  CUga gau  g
              AU AC    --    a   ag 

Annotation confidence High

Genome context

chr8: 298347764-298347831 [+]

Mature mdo-miR-148-3p

• Accession: MIMAT0012737
• Description: Monodelphis domestica mdo-miR-148-3p mature miRNA
• Sequence: 44 - UCAGUGCACUACAGAACUUUGU - 65
• Evidence: experimental ; Illumina [2]

Mature mdo-miR-148-5p

• Accession: MIMAT0026930
• Description: Monodelphis domestica mdo-miR-148-5p mature miRNA
• Sequence: 6 - AAAGUUCUGGGACACUCAGACU - 27
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45