miRBase entry: bmo-mir-2838

Stem-loop bmo-mir-2838


Accession
MI0012445
Description
Bombyx mori bmo-mir-2838 precursor miRNA


Sequence

66 reads, 13 reads per million, 3 experiments
aaaugauuuaAAUUCAGCAAACUCACGGGAUAAacucgcuaugguuuuauaugggagaucugugguagcugcauucuucaaaucuucg
....(((((.(((.((((..((.((((((.....(((.(((((......)))))))).)))))))).)))).)))....)))))....

Structure
aaau     ---a   U    AA  U      AUAAa   g     gu 
    gauuu    AAU CAGC  AC CACGGG     cuc cuaug  u
    |||||    ||| ||||  || ||||||     ||| |||||   
    cuaaa    uua gucg  ug gugucu     gag gguau  u
gcuu     cuuc   c    -a  -      ----a   -     au 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
NW_004582026.1: 5256547-5256634 [+]

Database links

Mature bmo-miR-2838

Accession MIMAT0013753
Description Bombyx mori bmo-miR-2838 mature miRNA
Sequence 11 - AAUUCAGCAAACUCACGGGAUAA - 33
Evidence experimental
Illumina [1]
Database links

References

  1. PubMed ID: 20199675
    MicroRNAs of Bombyx mori identified by Solexa sequencing
    Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
    BMC Genomics (2010) 11:148