miRBase entry: bmo-mir-2820-2

Stem-loop bmo-mir-2820-2


Accession
MI0012440
Description
Bombyx mori bmo-mir-2820-2 precursor miRNA
Gene family
MIPF0001034; mir-2820


Sequence

21 reads, 5 reads per million, 3 experiments
cgucaagccuauucaugauccuuuugcaucgugcaucgugcauggccuuagcgggacguaCAGCAAGAUGGAACGUGAAUAaggcgcuuua
......(((((((((((.(((((((((...((((.((.(((.........))).)).)))).)))))).))).))))))).))))......

Structure
cgucaa    -       a   -      auc    a  g   aug 
      gccu auucaug ucc uuuugc   gugc uc ugc   g
      |||| ||||||| ||| ||||||   |||| || |||   c
      cgga UAAGUGC AGG AGAACG   Caug ag gcg   c
auuucg    A       A   U      --A    c  g   auu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
NW_004581785.1: 101006-101096 [+]

Database links

Mature bmo-miR-2820

Accession MIMAT0013730
Description Bombyx mori bmo-miR-2820 mature miRNA
Sequence 61 - CAGCAAGAUGGAACGUGAAUA - 81
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20199675
    MicroRNAs of Bombyx mori identified by Solexa sequencing
    Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
    BMC Genomics (2010) 11:148