miRBase entry: bmo-mir-2828

Stem-loop bmo-mir-2828


Accession
MI0012424
Description
Bombyx mori bmo-mir-2828 precursor miRNA

Literature search
1 open access papers mention bmo-mir-2828
(1 sentences)

Sequence

114 reads, 27 reads per million, 3 experiments
uucacaacugAUAUUCGAUAUGUGAACGGUUccgagaacguaguugcggacuucuuaucgcgcauagagacuguaacguguuccacgaacaucgacua
..........(((.((..((((((..((((...(((..(((....)))..)))...))))))))))..)).)))..(((((((...))))).))....

Structure
--------------uucacaacug   U  GA      AA    Ucc   aa   a 
                        AUA UC  UAUGUG  CGGU   gag  cgu g
                        ||| ||  ||||||  ||||   |||  |||  
                        ugu ag  auacgc  gcua   uuc  gcg u
aucagcuacaagcaccuugugcaa   c  ag      --    uuc   ag   u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
NW_004581767.1: 584242-584339 [+]

Database links

Mature bmo-miR-2828

Accession MIMAT0013740
Description Bombyx mori bmo-miR-2828 mature miRNA
Sequence 11 - AUAUUCGAUAUGUGAACGGUU - 31
Evidence experimental
Illumina [1]
Database links

References

  1. PubMed ID: 20199675
    MicroRNAs of Bombyx mori identified by Solexa sequencing
    Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
    BMC Genomics (2010) 11:148