miRBase entry: bmo-mir-2808b

Stem-loop bmo-mir-2808b


Accession
MI0012423
Description
Bombyx mori bmo-mir-2808b precursor miRNA
Gene family
MIPF0000836; mir-2808

Literature search
1 open access papers mention bmo-mir-2808b
(1 sentences)

Sequence

60 reads, 13 reads per million, 3 experiments
cuuuuuuuuuggcuaccgaugcugguaaucucggcuaguuagugcuuCGUAGAAUCUACCAUCGGAUCagaaacgcgc
.....(((((((...((((((.(((...((((((..(((....)))))).)))..))).)))))).))))))).....

Structure
cuuuu       cua      c   uaa   -   cu   u 
     uuuuugg   ccgaug ugg   ucu cgg  agu a
     |||||||   |||||| |||   ||| |||  |||  
     aaagaCU   GGCUAC AUC   AGA GCu  ucg g
cgcgc       --A      C   -UA   U   --   u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
NW_004582034.1: 1389955-1390032 [+]

Database links

Mature bmo-miR-2808b

Accession MIMAT0013739
Description Bombyx mori bmo-miR-2808b mature miRNA
Sequence 48 - CGUAGAAUCUACCAUCGGAUC - 68
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20199675
    MicroRNAs of Bombyx mori identified by Solexa sequencing
    Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
    BMC Genomics (2010) 11:148