miRBase entry: bmo-mir-2826

Stem-loop bmo-mir-2826


Accession
MI0012421
Description
Bombyx mori bmo-mir-2826 precursor miRNA


Sequence

11 reads, 4 reads per million, 3 experiments
gaucgcugaaAAAAGAUCGAGGAUCCGAUAUUGggaccggccguuagugggaucucucgucugcucgcccgauugggggucg
.............(((.(((((((((.((..(((......)))...)).))))).)))))))....((((......))))..

Structure
-------gaucgcugaaAAA   U    -     G  -AU   ga 
                    AGA CGAG GAUCC AU   UGg  c
                    ||| |||| ||||| ||   |||   
                    ucu gcuc cuagg ug   gcc  c
gcuggggguuagcccgcucg   -    u     g  auu   gg 


Annotation confidence Not enough data
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Genome context
NW_004582032.1: 1982294-1982375 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from bmo-mir-2826
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bmo-miR-2826

Accession MIMAT0013737
Description Bombyx mori bmo-miR-2826 mature miRNA
Sequence 11 - AAAAGAUCGAGGAUCCGAUAUUG - 33
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20199675
    MicroRNAs of Bombyx mori identified by Solexa sequencing
    Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
    BMC Genomics (2010) 11:148