miRBase entry: bmo-mir-2825

Stem-loop bmo-mir-2825


Accession
MI0012420
Description
Bombyx mori bmo-mir-2825 precursor miRNA

Literature search
1 open access papers mention bmo-mir-2825
(1 sentences)

Sequence

27 reads, 7 reads per million, 3 experiments
aagugcuggagcagcuuucagauugggauaaugaggauacugauggagacgaagguccauCAGGAUCACGAAGAAGCUAUugccguauug
.(((((.(.((.((((((.................((..((((((((........))))))))..)).....)))))).)).).))))).

Structure
a     u g  c      cagauugggauaaugag  ua        gac 
 agugc g ag agcuuu                 ga  cugaugga   g
 ||||| | || ||||||                 ||  ||||||||    
 uuaug c uU UCGAAG                 CU  GACuaccu   a
g     c g  A      ------------AAGCA  AG        gga 


Annotation confidence Not enough data
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Genome context
NW_004582032.1: 1982746-1982835 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from bmo-mir-2825
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bmo-miR-2825

Accession MIMAT0013736
Description Bombyx mori bmo-miR-2825 mature miRNA
Sequence 61 - CAGGAUCACGAAGAAGCUAU - 80
Evidence experimental
Illumina [1]
Database links

References

  1. PubMed ID: 20199675
    MicroRNAs of Bombyx mori identified by Solexa sequencing
    Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
    BMC Genomics (2010) 11:148