miRBase entry: bmo-mir-2780b-1

Stem-loop bmo-mir-2780b-1


Accession
MI0012415
Description
Bombyx mori bmo-mir-2780b-1 precursor miRNA
Gene family
MIPF0000828; mir-2780


Sequence

1114 reads, 194 reads per million, 3 experiments
ccacggugaaAAGGGUGUUAAAUGAAGACUUAAggcuucgggcauaucgaagaaaaacaggacaucguuugaaugcucgucuaaugga
(((....((...(((((((((((((.(.(((....((((((.....))))))......))).).))))))).)))))).))...))).

Structure
-   cggu  aAA      -       A A   --AAgg      g 
 cca    ga   GGGUGU UAAAUGA G CUU      cuucgg c
 |||    ||   |||||| ||||||| | |||      |||||| a
 ggu    cu   cucgua guuugcu c gga      gaagcu u
a   -aau  --g      a       a a   caaaaa      a 


Annotation confidence Low
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Genome context
NW_004581873.1: 20651-20738 [+]

Database links

Mature bmo-miR-2780b

Accession MIMAT0013732
Description Bombyx mori bmo-miR-2780b mature miRNA
Sequence 11 - AAGGGUGUUAAAUGAAGACUUAA - 33
Evidence experimental
Illumina [1]
Database links

References

  1. PubMed ID: 20199675
    MicroRNAs of Bombyx mori identified by Solexa sequencing
    Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
    BMC Genomics (2010) 11:148