miRBase entry: bmo-mir-2780a-3

Stem-loop bmo-mir-2780a-3


Accession
MI0012406
Description
Bombyx mori bmo-mir-2780a-3 precursor miRNA
Gene family
MIPF0000828; mir-2780


Sequence

801 reads, 162 reads per million, 3 experiments
ccacggugaaAAGGGUGUUAAAUGAAGACUUAUggcuucggucauaucgaaguuaaacaggacaucguuugaaugcucgucaaaugga
(((...(((...(((((((((((((.(.(((.((((((((((...))))))))))...))).).))))))).)))))).)))..))).

Structure
-   cgg   aAA      -       A A   --A          c 
 cca   uga   GGGUGU UAAAUGA G CUU   Uggcuucggu  
 |||   |||   |||||| ||||||| | |||   |||||||||| a
 ggu   acu   cucgua guuugcu c gga   auugaagcua  
a   -aa   --g      a       a a   caa          u 


Annotation confidence Not enough data
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Genome context
NW_004582015.1: 1839171-1839258 [+]

Database links

Mature bmo-miR-2780a-5p

Accession MIMAT0013669
Description Bombyx mori bmo-miR-2780a-5p mature miRNA
Sequence 11 - AAGGGUGUUAAAUGAAGACUUAU - 33
Evidence experimental
Illumina [1]
Database links

References

  1. PubMed ID: 20199675
    MicroRNAs of Bombyx mori identified by Solexa sequencing
    Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
    BMC Genomics (2010) 11:148