miRBase entry: bmo-mir-2780a-2

Stem-loop bmo-mir-2780a-2


Accession
MI0012386
Description
Bombyx mori bmo-mir-2780a-2 precursor miRNA
Gene family
MIPF0000828; mir-2780


Sequence

1075 reads, 182 reads per million, 3 experiments
ccacggugaaAAGGGUGUUAAAUGAAGACUUAUggcuucgggcaugucgaagaaaaacaggacaucguuugaaugcucgucuaaugga
(((....((...(((((((((((((.(.(((.(..((((((.....))))))..)...))).).))))))).)))))).))...))).

Structure
-   cggu  aAA      -       A A   --A gg      g 
 cca    ga   GGGUGU UAAAUGA G CUU   U  cuucgg c
 |||    ||   |||||| ||||||| | |||   |  |||||| a
 ggu    cu   cucgua guuugcu c gga   a  gaagcu u
a   -aau  --g      a       a a   caa aa      g 


Annotation confidence Low
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Genome context
NW_004581758.1: 328891-328978 [-]

Database links

Mature bmo-miR-2780a-5p

Accession MIMAT0013669
Description Bombyx mori bmo-miR-2780a-5p mature miRNA
Sequence 11 - AAGGGUGUUAAAUGAAGACUUAU - 33
Evidence experimental
Illumina [1]
Database links

References

  1. PubMed ID: 20199675
    MicroRNAs of Bombyx mori identified by Solexa sequencing
    Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
    BMC Genomics (2010) 11:148