miRBase entry: bmo-mir-2800

Stem-loop bmo-mir-2800


Accession
MI0012376
Description
Bombyx mori bmo-mir-2800 precursor miRNA


Sequence

17 reads, 7 reads per million, 3 experiments
aauuuguaguAGAAUAUUGUGUCUUGUAAACUUaauucaguugagcacaugaaaaggguuucaggaaccauauuugugcacaauuu
...((((.(((((((((.((.(((((.((((((..((((((.....)).))))..))))))))))))).)))))).)))))))...

Structure
aau    a   -      U  G     U      aa    -  u 
   uugu guA GAAUAU GU UCUUG AAACUU  uuca gu g
   |||| ||| |||||| || ||||| ||||||  |||| || a
   aaca cgu uuuaua ca aggac uuuggg  aagu ca g
uuu    -   g      c  -     -      aa    a  c 


Annotation confidence Not enough data
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Genome context
NW_004581792.1: 335159-335244 [+]

Database links

Mature bmo-miR-2800

Accession MIMAT0013704
Description Bombyx mori bmo-miR-2800 mature miRNA
Sequence 11 - AGAAUAUUGUGUCUUGUAAACUU - 33
Evidence experimental
Illumina [1]
Database links

References

  1. PubMed ID: 20199675
    MicroRNAs of Bombyx mori identified by Solexa sequencing
    Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
    BMC Genomics (2010) 11:148