miRBase entry: bmo-mir-2797b

Stem-loop bmo-mir-2797b


Accession
MI0012371
Description
Bombyx mori bmo-mir-2797b precursor miRNA
Gene family
MIPF0000911; mir-2797


Sequence

11 reads, 4 reads per million, 2 experiments
uaucguaagcAUAAGUAGGUUCUUAUUCGGCUauguuuucaauucaagccgcauuaagccuacuuagacuggcgaca
..((((.((..((((((((((...((.(((((.((.........))))))).))..))))))))))..)).))))..

Structure
ua    a  cA          CUU  U     a  uuu 
  ucgu ag  UAAGUAGGUU   AU CGGCU ug   u
  |||| ||  ||||||||||   || ||||| ||   c
  agcg uc  auucauccga   ua gccga ac   a
ac    g  ag          -au  c     -  uua 


Annotation confidence Not enough data
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Genome context
NW_004581747.1: 1275307-1275383 [-]
Clustered miRNAs
4 other miRNAs are < 10 kb from bmo-mir-2797b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bmo-miR-2797b

Accession MIMAT0013699
Description Bombyx mori bmo-miR-2797b mature miRNA
Sequence 11 - AUAAGUAGGUUCUUAUUCGGCU - 32
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20199675
    MicroRNAs of Bombyx mori identified by Solexa sequencing
    Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
    BMC Genomics (2010) 11:148