miRBase entry: bmo-mir-2792

Stem-loop bmo-mir-2792


Accession
MI0012365
Description
Bombyx mori bmo-mir-2792 precursor miRNA


Sequence

39 reads, 19 reads per million, 2 experiments
ugaacugcugUGGUAUCGUUCUUUAAUCAACAcuuuaauuugaauaaugUAGAUUAGAUAGCGAUUCCAUUuacagugugc
...((((..((((.((((((.(((((((.(((.((((...))))...))).))))))).)))))).))))...))))....

Structure
-uga    -cu    U      C       A   --c    a 
    acug   gUGG AUCGUU UUUAAUC ACA   uuua  
    ||||   |||| |||||| ||||||| |||   |||| u
    ugac   UACC UAGCGA AGAUUAG Ugu   aagu  
cgug    auU    U      U       A   aau    u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
NW_004581721.1: 1233111-1233191 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from bmo-mir-2792
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bmo-miR-2792-5p

Accession MIMAT0013690
Description Bombyx mori bmo-miR-2792-5p mature miRNA
Sequence 11 - UGGUAUCGUUCUUUAAUCAACA - 32
Evidence experimental
Illumina [1]

Mature bmo-miR-2792-3p

Accession MIMAT0013691
Description Bombyx mori bmo-miR-2792-3p mature miRNA
Sequence 50 - UAGAUUAGAUAGCGAUUCCAUU - 71
Evidence experimental
Illumina [1]
Database links

References

  1. PubMed ID: 20199675
    MicroRNAs of Bombyx mori identified by Solexa sequencing
    Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
    BMC Genomics (2010) 11:148