Stem-loop sequence bmo-mir-2783

AccessionMI0012356 (change log)
DescriptionBombyx mori miR-2783 stem-loop
Literature search

1 open access papers mention bmo-mir-2783
(1 sentences)

Stem-loop 
   -  ug  g -a   g   agg     g    g  g ---a  a       
5'  ga  ac u  acg gcg   gugug gugu gc c    gc agccgg 
    ||  || |  ||| |||   ||||| |||| || |    || ||||| a
3'  cu  ug a  ugc ugu   cgcgu cgcg cg g    cg ucggcg 
   g  ug  g gg   g   --g     g    g  g cagg  g
Get sequence
Deep sequencing
19 reads, 0 reads per million, 3 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (ASM15162v1; GCA_000151625.1) Overlapping transcripts
NW_004581684.1: 4246794-4246885 [+]
intergenic
Clustered miRNAs
< 10kb from bmo-mir-2783
bmo-mir-2783NW_004581684.1: 4246794-4246885 [+]
bmo-mir-3304aNW_004581684.1: 4252402-4252529 [+]
Database links

Mature sequence bmo-miR-2783

Accession MIMAT0013679
Sequence

11 -  

cgggcgaggguguggguguggcg

 - 33

Get sequence
Deep sequencing15 reads, 2 experiments
Evidence experimental; Illumina [1]
Database links

References

1
PMID:20199675 "MicroRNAs of Bombyx mori identified by Solexa sequencing" Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q BMC Genomics. 11:148(2010).