miRBase entry: bmo-mir-2780a-1

Stem-loop bmo-mir-2780a-1


Accession
MI0012345
Description
Bombyx mori bmo-mir-2780a-1 precursor miRNA
Gene family
MIPF0000828; mir-2780


Sequence

909 reads, 182 reads per million, 3 experiments
ccacggugaaAAGGGUGUUAAAUGAAGACUUAUuagggcuucgggcauaucgaagaaaaacaggaAAUCGUUUGAAUGCUCGUCUAAugga
(((....((...(((((((((((((...(((.......((((((.....))))))......)))...))))))).)))))).))...))).

Structure
-   cggu  aAA      -       AGA   AUuaggg      g 
 cca    ga   GGGUGU UAAAUGA   CUU       cuucgg c
 |||    ||   |||||| |||||||   |||       |||||| a
 ggu    CU   CUCGUA GUUUGCU   gga       gaagcu u
a   -AAU  --G      A       AAa   -caaaaa      a 


Annotation confidence Not enough data
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Genome context
NW_004582022.1: 1297811-1297901 [-]

Database links

Mature bmo-miR-2780a-3p

Accession MIMAT0013670
Description Bombyx mori bmo-miR-2780a-3p mature miRNA
Sequence 66 - AAUCGUUUGAAUGCUCGUCUAA - 87
Evidence experimental
Illumina [1]
Database links

Mature bmo-miR-2780a-5p

Accession MIMAT0013669
Description Bombyx mori bmo-miR-2780a-5p mature miRNA
Sequence 11 - AAGGGUGUUAAAUGAAGACUUAU - 33
Evidence experimental
Illumina [1]
Database links

References

  1. PubMed ID: 20199675
    MicroRNAs of Bombyx mori identified by Solexa sequencing
    Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
    BMC Genomics (2010) 11:148