miRBase entry: bmo-mir-2774a-1

Stem-loop bmo-mir-2774a-1


Accession
MI0012331
Description
Bombyx mori bmo-mir-2774a-1 precursor miRNA
Gene family
MIPF0000829; mir-2774

Literature search
1 open access papers mention bmo-mir-2774a-1
(2 sentences)

Sequence

611 reads, 125 reads per million, 3 experiments
aagacgauaagggaucgccggucuaccgagcaauaucacccgCUCGGUGGAAGAUCGUCCCUuaaucuucac
..((.(((((((((.((....((((((((((..........))))))))))....)))))))).))).))..

Structure
aa  c   -      u  ccgg          aaua 
  ga gau aaggga cg    ucuaccgagc    u
  || ||| |||||| ||    ||||||||||     
  cu cua uUCCCU GC    AGGUGGCUCg    c
ca  u   a      -  UAGA          ccca 


Annotation confidence Not enough data
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Genome context
NW_004581715.1: 1230134-1230205 [-]

Database links

Mature bmo-miR-2774a

Accession MIMAT0013658
Description Bombyx mori bmo-miR-2774a mature miRNA
Sequence 43 - CUCGGUGGAAGAUCGUCCCU - 62
Evidence experimental
Illumina [1]
Database links

References

  1. PubMed ID: 20199675
    MicroRNAs of Bombyx mori identified by Solexa sequencing
    Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
    BMC Genomics (2010) 11:148