Stem-loop sequence bmo-mir-2760

Accession

MI0012314 (change log)

Description

Bombyx mori miR-2760 stem-loop

Stem-loop

   --c         c ag       ug           --------     c 
5'    cgaaugaaa g  gcuuaau  aaccaaaaagc        gcauc a
      ||||||||| |  |||||||  |||||||||||        ||||| c
3'    guuuauuuu c  ugaauug  uugguuuuuug        uguag u
   gau         a cu       --           acaaaauu     u 

Deep sequencing

62 reads, 0 reads per million, 3 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (ASM15162v1; GCA_000151625.1): NW_004582030.1: 2421649-2421739 [-]
• Overlapping transcripts:

  intergenic

Clustered miRNAs

< 10kb from bmo-mir-2760

• bmo-mir-2760: NW_004582030.1: 2421649-2421739 [-]
• bmo-mir-2745: NW_004582030.1: 2421486-2421564 [-]

Database links

• miRBase Tracker:MI0012314

Mature sequence bmo-miR-2760-5p

• Accession: MIMAT0013632
• Previous IDs: bmo-miR-2760*
• Sequence: 11 - cgaggcuuaauugaaccaaaaagc - 34
• Deep sequencing: 14 reads, 1 experiments
• Evidence: experimental; Illumina [1]
• Database links:
  • RNAcentral:URS00004D1FBF_7091

Mature sequence bmo-miR-2760-3p

• Accession: MIMAT0013633
• Previous IDs: bmo-miR-2760
• Sequence: 60 - uuuuugguuguuaaguuccauu - 81
• Deep sequencing: 48 reads, 3 experiments
• Evidence: experimental; Illumina [1]
• Database links:
  • RNAcentral:URS00002A5B3A_7091

References

1. PMID:20199675 "MicroRNAs of Bombyx mori identified by Solexa sequencing" Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q BMC Genomics. 11:148(2010).