Stem-loop isc-mir-96

Accession

MI0012288

Description

Ixodes scapularis isc-mir-96 precursor miRNA

Gene family

MIPF0000072; mir-96

Literature search

1 open access papers mention isc-mir-96
(2 sentences)

Sequence

gucaaacucgccuuccguuuUUUGGCACUAGCACAUUUUUGUguuucgaugcuacgacaaaaauugugguagugucaagcaauaggaagagucugcaaugc
(.((.((((...((((..((((((((((((.(((((((((((((.........)).))))))).)))).)))))))))).))..)))))))).))).....

Structure

----- u  a    gcc    gu  -          G    -       -  uuc 
     g ca acuc   uucc  uu UUUGGCACUA CACA UUUUUGU gu   g
     | || ||||   ||||  || |||||||||| |||| ||||||| ||   a
     c gu ugag   aagg  aa gaacugugau gugu aaaaaca ca   u
cguaa -  c    ---    au  c          g    u       g  ucg 

Annotation confidence Not enough data

Genome context

DS633978: 113205-113305 [+]

Mature isc-miR-96

• Accession: MIMAT0012708
• Description: Ixodes scapularis isc-miR-96 mature miRNA
• Sequence: 21 - UUUGGCACUAGCACAUUUUUGU - 42
• Evidence: not_experimental

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68