Stem-loop isc-mir-375

Accession

MI0012280

Description

Ixodes scapularis isc-mir-375 precursor miRNA

Gene family

MIPF0000114; mir-375

Sequence

cacaaaaccagccgagugcugacucgagcugcccgugcaaaacuggaaccacugcguuguUUUGUUCGUUCGGCUCGAGUUAgaaaccgguguggacacaa
.......(((((((.((.(((((((((((((..((.(((((((...............))))))).))..)))))))))))))..)))))).)))......

Structure

cacaaaa   -    a  -g             cc  u       uggaac 
       cca gccg gu  cugacucgagcug  cg gcaaaac      c
       ||| |||| ||  |||||||||||||  || |||||||      a
       ggu uggc ca  gAUUGAGCUCGGC  GC UGUUUug      c
-aacaca   g    -  aa             UU  U       uugcgu 

Annotation confidence Not enough data

Genome context

DS966815: 32746-32846 [-]

Mature isc-miR-375

• Accession: MIMAT0012700
• Description: Ixodes scapularis isc-miR-375 mature miRNA
• Sequence: 61 - UUUGUUCGUUCGGCUCGAGUUA - 82
• Evidence: not_experimental

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68