miRBase entry: isc-mir-133

Stem-loop isc-mir-133


Accession
MI0012266
Description
Ixodes scapularis isc-mir-133 precursor miRNA
Gene family
MIPF0000029; mir-133

Literature search
1 open access papers mention isc-mir-133
(5 sentences)

Sequence

uuagcuggcugaagccgggccaaaucgucauaauuccuaugaaaaggaaucucaauacauUUGGUCCCCUUCAACCAGCUGUgguuggcauagcucaacaa
.(((((((.(((((..(((((((((.((....((((((......))))))......))))))))))).))))).)))))))..((((((...)).))))..

Structure
-------------------u       c     cc         c  --caua      au 
                    uagcugg ugaag  gggccaaau gu      auuccu  g
                    ||||||| |||||  ||||||||| ||      ||||||   
                    GUCGACC ACUUC  CCUGGUUua ca      uaagga  a
aacaacucgauacgguuggU       A     -C         -  uaacuc      aa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature isc-miR-133

Accession MIMAT0012686
Description Ixodes scapularis isc-miR-133 mature miRNA
Sequence 61 - UUGGUCCCCUUCAACCAGCUGU - 82
Evidence not_experimental

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68