miRBase entry: isc-mir-124

Stem-loop isc-mir-124


Accession
MI0012265
Description
Ixodes scapularis isc-mir-124 precursor miRNA
Gene family
MIPF0000021; mir-124

Literature search
1 open access papers mention isc-mir-124
(1 sentences)

Sequence

gaccccuugcgugaacgcucuccguauucacugcgcgccuugaugugcccaaacguaucaUAAGGCACGCGGUGAAUGCCAAGaggcacgcuugcuaauca
........(((((..(.((((..((((((((((((.((((((.(((((......))).)))))))).))))))))))))..))))))))))..........

Structure
--gaccccuu     aa g    cc            c      a  -   cc 
          gcgug  c cucu  guauucacugcg gccuug ug ugc  a
          |||||  | ||||  |||||||||||| |||||| || |||   
          cgcac  g gaGA  CGUAAGUGGCGC CGGAAU ac aug  a
acuaaucguu     -- -    AC            A      -  u   ca 


Annotation confidence Not enough data
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Genome context
DS840700: 85144-85244 [+]

Database links

Mature isc-miR-124

Accession MIMAT0012685
Description Ixodes scapularis isc-miR-124 mature miRNA
Sequence 61 - UAAGGCACGCGGUGAAUGCCAAG - 83
Evidence not_experimental

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68