miRBase entry: dpu-mir-31

Stem-loop dpu-mir-31


Accession
MI0012240
Description
Daphnia pulex dpu-mir-31 precursor miRNA
Gene family
MIPF0000064; mir-31


Sequence

gaauggaggguuucgcgcgaAGGCAAGAUGUCGGCAUAGCUGAcgugcuaauccgaguguagcuguguuacaucgugccaacgugaaccgcucccaaugac
....((((((((.((((....((((.(((((.((((((((((((.((......)).)).))))))))))))))).))))..)))))))).)))).......

Structure
---gaau    -    u    cgaA    A     C          -  g  cu 
       ggag gguu cgcg    GGCA GAUGU GGCAUAGCUG Ac ug  a
       |||| |||| ||||    |||| ||||| |||||||||| || ||   
       ccuc ccaa gugc    ccgu cuaca uugugucgau ug gc  a
caguaac    g    -    --aa    g     -          g  a  cu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature dpu-miR-31

Accession MIMAT0012659
Description Daphnia pulex dpu-miR-31 mature miRNA
Sequence 21 - AGGCAAGAUGUCGGCAUAGCUGA - 43
Evidence not_experimental

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68