miRBase entry: dpu-mir-281

Stem-loop dpu-mir-281


Accession
MI0012236
Description
Daphnia pulex dpu-mir-281 precursor miRNA
Gene family
MIPF0000087; mir-46


Sequence

agagcuugagccgcaaagagagcuauccgugaacaguaugcugugugugcgaaaauucacUGUCAUGGAGCUGCUCUCUUUAUggaca
..........(((.(((((((((..(((((((.((((.(((.......))).......)))))))))))...))))))))).)))...

Structure
agagcuugag   c         -ua       a    ------a   ug 
          ccg aaagagagc   uccguga cagu       ugc  u
          ||| |||||||||   ||||||| ||||       |||  g
          ggU UUUCUCUCG   AGGUACU GUca       gcg  u
-------aca   A         UCG       -    cuuaaaa   ug 


Annotation confidence Not enough data
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Genome context
GL732533.1: 1065344-1065431 [-]

Database links

Mature dpu-miR-281

Accession MIMAT0012655
Description Daphnia pulex dpu-miR-281 mature miRNA
Sequence 61 - UGUCAUGGAGCUGCUCUCUUUAU - 83
Evidence not_experimental

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68