miRBase entry: dpu-mir-263a

Stem-loop dpu-mir-263a

Accession

MI0012230

Description

Daphnia pulex dpu-mir-263a precursor miRNA

Gene family

MIPF0000122; mir-263

Literature search

1 open access papers mention dpu-mir-263a
(1 sentences)

Sequence

guuguuggccgauucccgcAAUGGCACUGGAAGAAUUCACgggucgcaauuaaauuugacagauuugaauuucuggaaaaugacacacucguggaucuuca
...((.((......)).))..........(((((.(((((((((.........((((..((((........))))..)))).....)))))))))))))).

Structure

guuguuggccgauucccgcAAUGGCACUG     A         cgcaauuaa    ga    uuu 
                             GAAGA UUCACgggu         auuu  caga   g
                             ||||| |||||||||         ||||  ||||    
                             cuucu aggugcuca         uaaa  gucu   a
----------------------------a     -         ----cacag    ag    uua

Annotation confidence Not enough data

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Genome context

GL732609.1: 475601-475701 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from dpu-mir-263a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dpu-miR-263a

Accession	MIMAT0012649
Description	Daphnia pulex dpu-miR-263a mature miRNA
Sequence	20 - AAUGGCACUGGAAGAAUUCAC - 40
Evidence	not_experimental

References

PubMed ID: 19196333
The deep evolution of metazoan microRNAs
"Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
"Evol Dev (2009) 11:50-68