Stem-loop dpu-bantam

Accession

MI0012215

Description

Daphnia pulex dpu-bantam precursor miRNA

Gene family

MIPF0000153; bantam

Literature search

2 open access papers mention dpu-bantam
(2 sentences)

Sequence

ucggcuuuuaaaccucgagacuaguuuucucagugaucugccagauauuauuugaauuucUGAGAUCAUUGUGAAAGCUGAUUuuguggauagccucgacu
..((((......((.(((((.((((((((.(((((((((..((((.(((.....))).))))))))))))).)))))))).))))).))..))))......

Structure

----uc    uuuaaa  u     c        u         gc    u   a 
      ggcu      cc cgaga uaguuuuc cagugaucu  caga auu u
      ||||      || ||||| |||||||| |||||||||  |||| ||| u
      ccga      gg guuUU GUCGAAAG GUUACUAGA  GUcu uaa u
ucagcu    ----ua  u     A        U         --    u   g 

Annotation confidence Not enough data

Genome context

GL732637.1: 370149-370249 [+]

Mature dpu-bantam

• Accession: MIMAT0012634
• Description: Daphnia pulex dpu-bantam mature miRNA
• Sequence: 61 - UGAGAUCAUUGUGAAAGCUGAUU - 83
• Evidence: not_experimental

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68