Stem-loop sequence bmo-mir-2748

Accession

MI0012199 (change log)

Description

Bombyx mori miR-2748 stem-loop

Gene family

MIPF0000836; mir-2808

Stem-loop

   ucggaaac     ccacuga    au -       -----a       g       
5'         gcgac       gaag  c cggcgag      aaacuca ugggcu 
           |||||       ||||  | |||||||      ||||||| ||||| g
3'         cgcug       cuuc  g gccgcuc      uuugggu aucugu 
   ---gcgaa     -------    cc a       cuacaa       -       

Deep sequencing

521 reads, 0 reads per million, 3 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (ASM15162v1; GCA_000151625.1): NW_004582017.1: 5717387-5717480 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0012199

Mature sequence bmo-miR-2748

• Accession: MIMAT0012627
• Sequence: 26 - uccggcgagaaaacucaguggg - 47
• Deep sequencing: 130 reads, 3 experiments
• Evidence: experimental; cloned [1], RT-PCR [1]

References

1. PMID:19699294 "A discovery of novel microRNAs in the silkworm (Bombyx mori) genome" Yu X, Zhou Q, Cai Y, Luo Q, Lin H, Hu S, Yu J Genomics. 94:438-444(2009).