miRBase entry: bmo-mir-2748

Stem-loop bmo-mir-2748


Accession
MI0012199
Description
Bombyx mori bmo-mir-2748 precursor miRNA
Gene family
MIPF0000836; mir-2808


Sequence

336 reads, 88 reads per million, 3 experiments
ucggaaacgcgacccacugagaagaUCCGGCGAGAAAACUCAGUGGGcugugucuauggguuuaacauccucgccgagcccuucgucgcaagcg
........(((((.......((((..((((((((.(((((((.(((((...))))))))))))......))))))).)..))))))))).....

Structure
ucggaaac     ccacuga    aU -       -----A       G     u 
        gcgac       gaag  C CGGCGAG      AAACUCA UGGGc  
        |||||       ||||  | |||||||      ||||||| ||||| g
        cgcug       cuuc  g gccgcuc      uuugggu aucug  
---gcgaa     -------    cc a       cuacaa       -     u 


Annotation confidence Not enough data
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Genome context
NW_004582017.1: 5717387-5717480 [-]

Database links

Mature bmo-miR-2748

Accession MIMAT0012627
Description Bombyx mori bmo-miR-2748 mature miRNA
Sequence 26 - UCCGGCGAGAAAACUCAGUGGG - 47
Evidence experimental
cloned [1], RT-PCR [1]

References

  1. PubMed ID: 19699294
    A discovery of novel microRNAs in the silkworm (Bombyx mori) genome
    "Yu X, Zhou Q, Cai Y, Luo Q, Lin H, Hu S, Yu J"
    "Genomics (2009) 94:438-444