miRBase entry: aqc-MIR398b

Stem-loop aqc-MIR398b


Accession
MI0012097
Description
Aquilegia caerulea aqc-MIR398b precursor miRNA
Gene family
MIPF0000107; MIR398


Sequence

ggggguaacaugagaauacaugaaauagauacuaucagagagucauuccauuguaguaucaguuucuuccaUGUGUUCUCAGGUCGCCCCUGc
((((((.((.((((((((((((((((.(((((((.(((.(........).)))))))))).)))))....))))))))))).)).))))))..

Structure
--      a  a           ----     a       u   a agu 
  gggggu ac ugagaauacau    gaaau gauacua cag g   c
  |||||| || |||||||||||    ||||| ||||||| ||| |    
  UCCCCG UG ACUCUUGUGUa    cuuug cuaugau guu c   a
cG      C  G           ccuu     a       -   a cuu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature aqc-miR398b

Accession MIMAT0012579
Description Aquilegia caerulea aqc-miR398b mature miRNA
Sequence 72 - UGUGUUCUCAGGUCGCCCCUG - 92
Evidence not_experimental

References

  1. PubMed ID: 19699282
    Identification of conserved Aquilegia coerulea microRNAs and their targets
    "Puzey JR, Kramer EM"
    "Gene (2009) 448:46-56