miRBase entry: aqc-MIR171a

Stem-loop aqc-MIR171a


Accession
MI0012084
Description
Aquilegia caerulea aqc-MIR171a precursor miRNA
Gene family
MIPF0000030; MIR171_1


Sequence

gauguuggcucgguucauucagacuuauauauauaccaccaauguuuacagagauguaaauaaaaguggugcaguuguuUGAUUGAGCCGUGCCAAUAUCuu
(((((((((.(((((((.((((((.........((((((...((((((((....))))))))...)))))).....)))))).))))))).)))))))))..

Structure
--         u       u      uuauauaua      caa        g 
  gauguuggc cgguuca ucagac         uaccac   uguuuaca a
  ||||||||| ||||||| ||||||         ||||||   ||||||||  
  CUAUAACCG GCCGAGU AGUuug         guggug   auaaaugu g
uu         U       U      ----uugac      aaa        a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature aqc-miR171a

Accession MIMAT0012566
Description Aquilegia caerulea aqc-miR171a mature miRNA
Sequence 80 - UGAUUGAGCCGUGCCAAUAUC - 100
Evidence not_experimental

References

  1. PubMed ID: 19699282
    Identification of conserved Aquilegia coerulea microRNAs and their targets
    "Puzey JR, Kramer EM"
    "Gene (2009) 448:46-56