Stem-loop mtr-MIR2668

Accession

MI0012022

Description

Medicago truncatula mtr-MIR2668 precursor miRNA

Sequence

aaugguuaaauauguauUUCAUCCUUGCAAUUAGGGGUCguuuaaaaauugguccuuauauuuguuaauccugacaauuuaccccuaauugcaagaaugaaauacauauuuaagucuaua
.(((((((((((((((((((((.(((((((((((((((.......((((((.......................))))))))))))))))))))).)))))))))))))))))..)))).

Structure

a    --                 C               Cguuuaa      guccuuauau 
 augg  uuaaauauguauUUCAU CUUGCAAUUAGGGGU       aaauug          u
 ||||  ||||||||||||||||| |||||||||||||||       ||||||          u
 uauc  aauuuauacauaaagua gaacguuaaucccca       uuuaac          g
a    ug                 a               -------      aguccuaauu 

Annotation confidence Not enough data

Genome context

chr3: 25640792-25640911 [+]

Mature mtr-miR2668

• Accession: MIMAT0013475
• Description: Medicago truncatula mtr-miR2668 mature miRNA
• Sequence: 18 - UUCAUCCUUGCAAUUAGGGGUC - 39
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19767456
   Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules
   "Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M"
   "Plant Cell (2009) 21:2780-2796