Stem-loop mtr-MIR2661

Accession

MI0012015

Description

Medicago truncatula mtr-MIR2661 precursor miRNA

Sequence

guagcuucuugauuuugcaaUAGGUUUGAGAAAAUGGGCAGuucauucauuagaaugagagagacuauuugucaaaaaucucaagucuuuuagaauuguccauuuucucagaucuauuacaaacaccguugaagaacc
....((((.....((((.((((((((((((((((((((((((((.......(((.(((((..(((.....))).....)))))..)))....)))))))))))))))))))))))))).)))).......))))....

Structure

guag    --uugau    c                          auucauu   -a     ---ga   u 
    cuuc       uuug aaUAGGUUUGAGAAAAUGGGCAGuuc       aga  ugaga     gac a
    ||||       |||| ||||||||||||||||||||||||||       |||  |||||     ||| u
    gaag       aaac uuaucuagacucuuuuaccuguuaag       ucu  acucu     cug u
ccaa    uugccac    a                          ---auuu   ga     aaaaa   u 

Annotation confidence Not enough data

Genome context

chr3: 18890004-18890141 [+]

Mature mtr-miR2661

• Accession: MIMAT0013468
• Description: Medicago truncatula mtr-miR2661 mature miRNA
• Sequence: 21 - UAGGUUUGAGAAAAUGGGCAG - 41
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19767456
   Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules
   "Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M"
   "Plant Cell (2009) 21:2780-2796