Stem-loop mtr-MIR2654

Accession

MI0011986

Description

Medicago truncatula mtr-MIR2654 precursor miRNA

Sequence

uugauugagauaugacaaAUUCAGGGACAAAGUGUGCGuuucgauaaauugggggacauuuuuguccgauucgugcaaauucagggacgaauuuggauauucacucua
......(((...(((...(((((.(((((((((((.(.((..........)).).))).))))))))(((((((.(........).))))))))))))..))))))..

Structure

uugauu   aua   caa     -------------------------G        -   G G  ucga 
      gag   uga   AUUCA                          GGACAAAG UGU C uu    u
      |||   |||   |||||                          |||||||| ||| | ||     
      cuc   acu   uaggu                          ccuguuuu aca g gg    a
----au   ---   -ua     uuaagcagggacuuaaacgugcuuag        u   g g  uuaa 

Annotation confidence Not enough data

Genome context

chr3: 31151589-31151696 [+]

Mature mtr-miR2654

• Accession: MIMAT0013439
• Description: Medicago truncatula mtr-miR2654 mature miRNA
• Sequence: 19 - AUUCAGGGACAAAGUGUGCG - 38
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19767456
   Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules
   "Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M"
   "Plant Cell (2009) 21:2780-2796