Stem-loop mtr-MIR2642

Accession

MI0011957

Description

Medicago truncatula mtr-MIR2642 precursor miRNA

Sequence

uuugauugguuaaaauuuacAUGAGUUUCAUCAAAUCAUGUgguucccauauaaauuuugugagacguaugugaacuuuaaccaaucaaag
((((((((((((((.((((((((.(((((((.((((.((((((...))))))..)))).))))))).)))))))).)))))))))))))).

Structure

-              a        A       C    -C      u 
 uuugauugguuaaa uuuacAUG GUUUCAU AAAU  AUGUgg  
 |||||||||||||| |||||||| ||||||| ||||  |||||| u
 aaacuaaccaauuu aaguguau cagagug uuua  uauacc  
g              c        g       u    aa      c 

Annotation confidence Not enough data

Genome context

chr3: 1759989-1760079 [+]

Mature mtr-miR2642

• Accession: MIMAT0013410
• Description: Medicago truncatula mtr-miR2642 mature miRNA
• Sequence: 21 - AUGAGUUUCAUCAAAUCAUGU - 41
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19767456
   Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules
   "Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M"
   "Plant Cell (2009) 21:2780-2796