miRBase entry: mtr-MIR2636

Stem-loop mtr-MIR2636


Accession
MI0011949
Description
Medicago truncatula mtr-MIR2636 precursor miRNA
Gene family
MIPF0000913; MIR2599


Sequence

guggguacaaggaauccacuuuauuaaacacacuaaccaaaaaacuguaauuucuaagauauguuucaaauuaagguguuUUUGGUUAGUGUGCUGAAUAUaguagauucauuguaccca
.(((((((((.(((((.(((.((((...((((((((((((((((((.((((((..((......))..)))))).))).)))))))))))))))...)))).))).))))).)))))))))

Structure
g         g     c   u    aaa               -   g      cu  ga 
 uggguacaa gaauc acu uauu   cacacuaaccaaaaa acu uaauuu  aa  u
 ||||||||| ||||| ||| ||||   ||||||||||||||| ||| ||||||  ||   
 acccauguu cuuag uga AUAA   GUGUGAUUGGUUUuu ugg auuaaa  uu  a
-         a     a   U    GUC               g   a      cu  gu 


Annotation confidence Not enough data
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Genome context
chr5: 27514652-27514771 [-]

Database links

Mature mtr-miR2636

Accession MIMAT0013402
Description Medicago truncatula mtr-miR2636 mature miRNA
Sequence 81 - UUUGGUUAGUGUGCUGAAUAU - 101
Evidence experimental
454 [1]

References

  1. PubMed ID: 19767456
    Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules
    "Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M"
    "Plant Cell (2009) 21:2780-2796