miRBase entry: mtr-MIR2629f

Stem-loop mtr-MIR2629f


Accession
MI0011915
Description
Medicago truncatula mtr-MIR2629f precursor miRNA
Gene family
MIPF0000824; MIR2629


Sequence

caggacgcaucggcaguuaacugcugauggaaacgaugauaguuaacugccgaAGUUUUCCUCGGUAGUUAACUgccgcugguucuu
.(((((.((.(((((((((((((((((.((((((..((.(((....))).))..)))))).))))))))))))))))).))))))).

Structure
c     g  u                 u      ga  a   u 
 aggac ca cggcaguuaacugcuga ggaaac  ug uag u
 ||||| || ||||||||||||||||| ||||||  || |||  
 ucuug gu gccgUCAAUUGAUGGCU CUUUUG  gc guc a
u     -  c                 C      Aa  c   a 


Annotation confidence Not enough data
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Genome context
chr5: 20006463-20006549 [-]

Database links

Mature mtr-miR2629f

Accession MIMAT0013368
Description Medicago truncatula mtr-miR2629f mature miRNA
Sequence 54 - AGUUUUCCUCGGUAGUUAACU - 74
Evidence experimental
454 [1]

References

  1. PubMed ID: 19767456
    Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules
    "Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M"
    "Plant Cell (2009) 21:2780-2796