miRBase entry: mtr-MIR2629d

Stem-loop mtr-MIR2629d


Accession
MI0011911
Description
Medicago truncatula mtr-MIR2629d precursor miRNA
Gene family
MIPF0000824; MIR2629


Sequence

cucgauaguuuacugccgaAGUUUUCCUCGGUAGUUAACUuccauaauucggcaguuaacugccgaugagcauuucgguaaauuacuaauaugac
.....((((....(((((((((.(((.(((((((((((((.((.......)).))))))))))))).))).)))))))))....)))).......

Structure
--cucga    uuac         U   C             u  au 
       uagu    ugccgaAGU UUC UCGGUAGUUAACU cc  a
       ||||    ||||||||| ||| ||||||||||||| ||  a
       auca    auggcuuua gag agccgucaauuga gg  u
caguaua    uuaa         c   u             c  cu 


Annotation confidence Not enough data
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Genome context
chr3: 15594507-15594601 [+]

Database links

Mature mtr-miR2629d

Accession MIMAT0013364
Description Medicago truncatula mtr-miR2629d mature miRNA
Sequence 20 - AGUUUUCCUCGGUAGUUAACU - 40
Evidence experimental
454 [1]

References

  1. PubMed ID: 19767456
    Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules
    "Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M"
    "Plant Cell (2009) 21:2780-2796