Stem-loop mtr-MIR2625

Accession

MI0011893

Description

Medicago truncatula mtr-MIR2625 precursor miRNA

Sequence

aCCAUCGUGCCACGUUACGAUCCaaucgugacacgaucaccucauuaauccuacguggcagcagacaaauuuucauaucguggcacguuccagacuuuaucguggcacaaaauuuccaguggcaaauucuuugucccacguucaacaaucgugccacgagauguucuaaacguggcacgaug
..((((((((((((((..((.....(((((.((((((...............((((((.....((((((..........(((.((((.............)))).)))..(((((((...)).))))).))))))))))))......)))))).))))).....))..))))))))))))))

Structure

aC              AC  UCCaa     a      caccucauuaauccu      cagca      -----------uuuucauauc   g    uucca 
  CAUCGUGCCACGUU  GA     ucgug cacgau               acgugg     gacaaa                     gug cacg     g
  ||||||||||||||  ||     ||||| ||||||               ||||||     ||||||                     ||| ||||     a
  guagcacggugcaa  cu     agcac gugcua               ugcacc     cuguuu                     cac gugc     c
--              au  uguag     c      ---------acaacu      -----      cuuaaacggugaccuuuaaaa   g    uauuu 

Annotation confidence Not enough data

Genome context

chr2: 2760406-2760587 [+]

Mature mtr-miR2625

• Accession: MIMAT0013346
• Description: Medicago truncatula mtr-miR2625 mature miRNA
• Sequence: 2 - CCAUCGUGCCACGUUACGAUCC - 23
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19767456
   Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules
   "Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M"
   "Plant Cell (2009) 21:2780-2796