miRBase entry: mtr-MIR2607

Stem-loop mtr-MIR2607


Accession
MI0011860
Description
Medicago truncatula mtr-MIR2607 precursor miRNA


Sequence

cacaugcauauaaggagucuaagagcauugucacauugucaugauuaagaugccuuguugauaaugauugaauAUGUGAUUAUGUGAUAAGUGUuuauugauuauguuauguu
.......((((((.(((((...((((((((((((((.(((((((((((.(.....).)))))............)))))).))))))).)))))))...)))).).)))))).

Structure
cacaugc      g -    uaa       -       u      ------------     g u 
       auauaa g aguc   gagcauu gucacau gucaug            auuaa a g
       |||||| | ||||   ||||||| ||||||| ||||||            ||||| | c
       uguauu u uuag   uuUGUGA UAGUGUA UAGUGU            uaguu u c
------u      g a    uua       A       U      Auaaguuaguaa     g u 


Annotation confidence Not enough data
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Genome context
chr6: 3391869-3391981 [+]

Database links

Mature mtr-miR2607

Accession MIMAT0013313
Description Medicago truncatula mtr-miR2607 mature miRNA
Sequence 74 - AUGUGAUUAUGUGAUAAGUGU - 94
Evidence experimental
454 [1]

References

  1. PubMed ID: 19767456
    Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules
    "Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M"
    "Plant Cell (2009) 21:2780-2796