Stem-loop sequence mtr-MIR2590c

AccessionMI0011810 (change log)
DescriptionMedicago truncatula miR2590c stem-loop
Gene family MIPF0000834; MIR2590
Literature search

1 open access papers mention mtr-MIR2590c
(1 sentences)

Stem-loop 
   aaaau           c      g          c   a     aucaauaaau      gaaauuaauguuagccaauaaaaucucagucuagccggaaaucau 
5'      uuuaagaauga auggca aauaaucacc uua auuuu          agucuu                                             g
        ||||||||||| |||||| |||||||||| ||| |||||          ||||||                                              
3'      aaguucuuacu uaccgu uuauuagugg aau uaaag          ucagag                                             g
   uuuau           u      g          a   c     ----------      uaaauaauuagaaaguauuuauuuuuuauguauuguggguggugg
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (JCVI_Mt3.5.2) Overlapping transcripts
chr5: 36310085-36310286 [-]
intergenic
Database links

Mature sequence mtr-miR2590c

Accession MIMAT0013263
Sequence

162 -  

aucuaaaggugauuauugugcc

 - 183

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Evidence experimental; 454 [1]

References

1
PMID:19767456 "Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules" Lelandais-Briere C, Naya L, Sallet E, Calenge F, Frugier F, Hartmann C, Gouzy J, Crespi M Plant Cell. 21:2780-2796(2009).