miRBase entry: dsi-mir-2579

Stem-loop dsi-mir-2579


Accession
MI0011781
Description
Drosophila simulans dsi-mir-2579 precursor miRNA


Sequence

acgccaaggGUAAGUGACCCAGUUGAGCGgacugaauccgaauugcgacgcucgauugaucgugacuuugcagcgua
((((...(.(.((((.((.((((((((((...................))))))))))...)).))))).).)))).

Structure
-    caa g U    G  --C          gacugaau 
 acgc   g G AAGU AC   CAGUUGAGCG        c
 ||||   | | |||| ||   ||||||||||        c
 ugcg   c u uuca ug   guuagcucgc        g
a    --a g -    g  cua          agcguuaa 


Annotation confidence Not enough data
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Genome context
chr3R: 19334301-19334377 [+]

Database links

Mature dsi-miR-2579

Accession MIMAT0012512
Description Drosophila simulans dsi-miR-2579 mature miRNA
Sequence 10 - GUAAGUGACCCAGUUGAGCG - 29
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20037610
    Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
    "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
    "Nat Genet (2010) 42:6-9