miRBase entry: dsi-mir-1013

Stem-loop dsi-mir-1013


Accession
MI0011770
Description
Drosophila simulans dsi-mir-1013 precursor miRNA
Gene family
MIPF0000985; mir-1013


Sequence

ggaccaaagcccaccgugcuggagaggugaguuucguacacuuaauuaauaggaucggccguuaAUAAAAGUAUGCCGAACUCGCAGgcgacggaugcgcgaucacca
((......((.(((((((((......((((((((.(((.((((.((((((.((.....))))))))..)))).))).)))))))).))).)))).)).)).....)).

Structure
-  accaaa  c  -    -   ggagag        c   c    -a      a  a 
 gg      gc ca ccgu gcu      gugaguuu gua acuu  auuaau gg u
 ||      || || |||| |||      |||||||| ||| ||||  |||||| || c
 cc      cg gu ggca cgG      CGCUCAAG CGU UGAA  UAauug cc g
a  -acuag  c  a    g   -----A        C   A    AA      -  g 


Annotation confidence Not enough data
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Genome context
chr3R: 26257480-26257587 [-]

Database links

Mature dsi-miR-1013

Accession MIMAT0012499
Description Drosophila simulans dsi-miR-1013 mature miRNA
Sequence 65 - AUAAAAGUAUGCCGAACUCGCAG - 87
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20037610
    Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
    "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
    "Nat Genet (2010) 42:6-9