miRBase entry: dsi-mir-968

Stem-loop dsi-mir-968


Accession
MI0011739
Description
Drosophila simulans dsi-mir-968 precursor miRNA
Gene family
MIPF0000865; mir-968


Sequence

uuguucauggaagcuuccuUAAGUAGUAUCCAUUAAAGGGUUGuucucaacaugcaaaucaACCGUUUGAUGUACUACUUUAGgaaucuacagucaaa
(((....((((...(((((.((((((((..(((((((.(((((................))))).))))))))))))))).)))))))))....))).

Structure
-   uuca    agc     U        UC       G     uucucaa 
 uug    ugga   uuccu AAGUAGUA  CAUUAAA GGUUG       c
 |||    ||||   ||||| ||||||||  ||||||| |||||        
 aac    aucu   aagGA UUCAUCAU  GUAGUUU CCAac       a
a   ugac    ---     U        --       G     uaaacgu 


Annotation confidence Not enough data
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Genome context
chr2L: 13506683-13506780 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from dsi-mir-968
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dsi-miR-968-5p

Accession MIMAT0012441
Description Drosophila simulans dsi-miR-968-5p mature miRNA
Sequence 20 - UAAGUAGUAUCCAUUAAAGGGUUG - 43
Evidence experimental
Illumina [1]

Mature dsi-miR-968-3p

Accession MIMAT0012442
Description Drosophila simulans dsi-miR-968-3p mature miRNA
Sequence 62 - ACCGUUUGAUGUACUACUUUAG - 83
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20037610
    Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
    "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
    "Nat Genet (2010) 42:6-9