miRBase entry: dsi-mir-1012

Stem-loop dsi-mir-1012


Accession
MI0011731
Description
Drosophila simulans dsi-mir-1012 precursor miRNA
Gene family
MIPF0001046; mir-1012


Sequence

gccacuaauccaaaagaacgGUGGGUAGAACUUUGAUUAAUAuugcuugagaauaUUAGUCAAAGAUUUUCCCCAUAGauuuaucaauuuuggc
((((..(((...........(((((.((((((((((((((((((.......)))))))))))))).)))).)))))..........))).))))

Structure
    cu   ccaaaagaacg     U    -              gc 
gcca  aau           GUGGG AGAA CUUUGAUUAAUAuu  u
||||  |||           ||||| |||| ||||||||||||||  u
cggu  uua           UACCC UUUU GAAACUGAUUauaa  g
    -u   -acuauuuaGA     C    A              ga 


Annotation confidence Not enough data
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Genome context
chr3R: 22517514-22517607 [-]

Database links

Mature dsi-miR-1012-5p

Accession MIMAT0012425
Description Drosophila simulans dsi-miR-1012-5p mature miRNA
Sequence 21 - GUGGGUAGAACUUUGAUUAAUA - 42
Evidence experimental
Illumina [1]

Mature dsi-miR-1012-3p

Accession MIMAT0012426
Description Drosophila simulans dsi-miR-1012-3p mature miRNA
Sequence 56 - UUAGUCAAAGAUUUUCCCCAUAG - 78
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20037610
    Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
    "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
    "Nat Genet (2010) 42:6-9