miRBase entry: dps-mir-2567b

Stem-loop dps-mir-2567b


Accession
MI0011715
Description
Drosophila pseudoobscura dps-mir-2567b precursor miRNA
Gene family
MIPF0000934; mir-2567


Sequence

uuuucaguuuuuuACCAGGUUAGAUUUGCGAAACGuugaauuuagcucgUCUCACAGCUCUAACCUGGCAAuuuugcuugagaaa
((((((((...((.((((((((((.(((.((.(((............))).)).))).)))))))))).))....)).)))))).

Structure
-      -  -uuu  A          U   C  A   uugaa 
 uuuuca gu    uu CCAGGUUAGA UUG GA ACG     u
 |||||| ||    || |||||||||| ||| || |||      
 aagagu cg    AA GGUCCAAUCU GAC CU Ugc     u
a      u  uuuu  C          C   A  C   ucgau 


Annotation confidence Not enough data
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Genome context
4_group4: 3554452-3554536 [+]
Clustered miRNAs
8 other miRNAs are < 10 kb from dps-mir-2567b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dps-miR-2567b-5p

Accession MIMAT0012402
Description Drosophila pseudoobscura dps-miR-2567b-5p mature miRNA
Sequence 14 - ACCAGGUUAGAUUUGCGAAACG - 35
Evidence experimental
Illumina [1]

Mature dps-miR-2567b-3p

Accession MIMAT0012403
Description Drosophila pseudoobscura dps-miR-2567b-3p mature miRNA
Sequence 50 - UCUCACAGCUCUAACCUGGCAA - 71
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20037610
    Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
    "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
    "Nat Genet (2010) 42:6-9