Stem-loop dps-mir-2559

Accession

MI0011703

Description

Drosophila pseudoobscura dps-mir-2559 precursor miRNA

Sequence

caguggcuggacaagagGUGUGUGGGAUACUGAUUUUAGAGAaaaaaaaaaccauuaacgugaggcuucguuucUCACAUCAUUUUCCCCUCACAGUgcccggugccug
(((..(((((.((....(((.(.((((...((((....((((((.......((((....))).)......))))))..))))...))))).)))..)).)))))..)))

Structure

   ug     a  agag   U U    UAC    UUUA      aaaaaaa -   u 
cag  gcugg ca    GUG G GGGA   UGAU    GAGAaa       c cau a
|||  ||||| ||    ||| | ||||   ||||    ||||||       | |||  
guc  uggcc gU    CAC C CCCU   ACUA    CUcuuu       g gug a
   cg     c  --GA   U -    UUU    --CA      -gcuucg a   c 

Annotation confidence Not enough data

Genome context

4_group3: 4962040-4962148 [-]

Mature dps-miR-2559-5p

• Accession: MIMAT0012380
• Description: Drosophila pseudoobscura dps-miR-2559-5p mature miRNA
• Sequence: 18 - GUGUGUGGGAUACUGAUUUUAGAGA - 42
• Evidence: experimental ; Illumina [1]

Mature dps-miR-2559-3p

• Accession: MIMAT0012381
• Description: Drosophila pseudoobscura dps-miR-2559-3p mature miRNA
• Sequence: 75 - UCACAUCAUUUUCCCCUCACAGU - 97
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9