Stem-loop dps-mir-2556

Accession

MI0011699

Description

Drosophila pseudoobscura dps-mir-2556 precursor miRNA

Sequence

uagaggcaucguuggcggugccuguaaguGUAUGCCGGAGGUUCACUAGCGACUuuuaaaucuAGUUCUCCGCUUCACUUACAGcggacaagcugaccaccuuuag
((((((....((((((.((.((((((((((...((.(((((...(((((............))))))))))))..))))))))).).))..))))))..)))))).

Structure

-      cauc      -g  g -         UAU  C     UUC     CGACU 
 uagagg    guuggc  gu c cuguaaguG   GC GGAGG   ACUAG     u
 ||||||    ||||||  || | |||||||||   || |||||   |||||      
 auuucc    cagucg  ca g GACAUUCAC   CG CCUCU   UGAuc     u
g      --ac      aa  g c         -UU  -     ---     uaaau 

Annotation confidence Not enough data

Genome context

3: 16971285-16971390 [+]

Mature dps-miR-2556-5p

• Accession: MIMAT0012374
• Description: Drosophila pseudoobscura dps-miR-2556-5p mature miRNA
• Sequence: 30 - GUAUGCCGGAGGUUCACUAGCGACU - 54
• Evidence: experimental ; Illumina [1]

Mature dps-miR-2556-3p

• Accession: MIMAT0012375
• Description: Drosophila pseudoobscura dps-miR-2556-3p mature miRNA
• Sequence: 64 - AGUUCUCCGCUUCACUUACAG - 84
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9