miRBase entry: dps-mir-2523

Stem-loop dps-mir-2523


Accession
MI0011656
Description
Drosophila pseudoobscura dps-mir-2523 precursor miRNA


Sequence

ucaaaugagaaugaaaugagauacuuuagguuauauguuuuuaccuucgguuuuuugguaucugAAGUAACUACAUAUGAUCGAGAgugccucuguuucuuggccacauucgac
((.((((.....((((((((.((((((.((((((((((..((((.(((((...........)))))))))..)))))))))).)))))).))).))))).......)))).)).

Structure
-  a    --agaau     -   a      a          uu    c     uuuu 
 uc aaug       gaaau gag uacuuu gguuauaugu  uuac uucgg    u
 || ||||       ||||| ||| |||||| ||||||||||  |||| |||||    u
 ag uuac       cuuug cuc gugAGA CUAGUAUACA  AAUG AAguc    g
c  c    accgguu     u   c      G          UC    -     uaug 


Annotation confidence Not enough data
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Genome context
XL_group1e: 8366995-8367108 [-]
Clustered miRNAs
14 other miRNAs are < 10 kb from dps-mir-2523
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dps-miR-2523

Accession MIMAT0012311
Description Drosophila pseudoobscura dps-miR-2523 mature miRNA
Sequence 65 - AAGUAACUACAUAUGAUCGAGA - 86
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20037610
    Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
    "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
    "Nat Genet (2010) 42:6-9