miRBase entry: dps-mir-2528-2

Stem-loop dps-mir-2528-2


Accession
MI0011651
Description
Drosophila pseudoobscura dps-mir-2528-2 precursor miRNA
Gene family
MIPF0001059; mir-2528


Sequence

acggaauuuuacguauuuauccgUUUUGUCUGUAUCGCGAAGUUUGGagucguuuuuguugaagcgauuccacgcauuuucgaguacugauauuuuggcuugacaauaagaggccguu
((((..(((((.((......(((...((((.((((((.(((((.((((((((((((....)))))))))))).)).))).))).))).))))...)))....))..)))))..)))).

Structure
-    aa     -c  auuuau   UUU    U   -   C   -  U            u 
 acgg  uuuua  gu      ccg   UGUC GUA UCG GAA GU UGGagucguuuu g
 ||||  |||||  ||      |||   |||| ||| ||| ||| || ||||||||||||  
 ugcc  agaau  ca      ggu   auag cau agc uuu cg accuuagcgaag u
u    gg     aa  --guuc   uuu    u   g   u   a  c            u 


Annotation confidence Not enough data
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Genome context
Unknown_singleton_1587: 1510-1627 [+]

Database links

Mature dps-miR-2528

Accession MIMAT0012306
Description Drosophila pseudoobscura dps-miR-2528 mature miRNA
Sequence 24 - UUUUGUCUGUAUCGCGAAGUUUGG - 47
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20037610
    Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
    "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
    "Nat Genet (2010) 42:6-9