miRBase entry: dps-mir-2518-1

Stem-loop dps-mir-2518-1


Accession
MI0011649
Description
Drosophila pseudoobscura dps-mir-2518-1 precursor miRNA
Gene family
MIPF0000858; mir-2518


Sequence

gggcagccacacacacacgaccggaucgaacccguugugaaucgaacuugguucgaguUCGAGCAGCGGGUCGAUCCGAGCcauagccca
((((..............(..((((((((.((((((((...(((((((((...)))))))))))))))))))))))))..)....)))).

Structure
-    agccacacacacac ac        a        gaa         g 
 gggc              g  cggaucga cccguugu   ucgaacuug  
 ||||              |  |||||||| ||||||||   ||||||||| u
 cccg              C  GCCUAGCU GGGCGACG   AGCUugagc  
a    ----------auac GA        -        ---         u 


Annotation confidence Not enough data
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Genome context
Unknown_singleton_1205: 540-629 [+]

Database links

Mature dps-miR-2518

Accession MIMAT0012301
Description Drosophila pseudoobscura dps-miR-2518 mature miRNA
Sequence 59 - UCGAGCAGCGGGUCGAUCCGAGC - 81
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20037610
    Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
    "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
    "Nat Genet (2010) 42:6-9