miRBase entry: dps-mir-2518-4

Stem-loop dps-mir-2518-4


Accession
MI0011645
Description
Drosophila pseudoobscura dps-mir-2518-4 precursor miRNA
Gene family
MIPF0000858; mir-2518


Sequence

cggccaacgggcagccacacacacacacacgaccggaucgaacccguugcgaaucgaacuugguuugaguUCGAGCAGCGGGUCGAUCCGAGCcauagcccagcc
.(((....((((..................(..((((((((.((((((((...((((((((.....))))))))))))))))))))))))..)....)))).)))

Structure
c   caac    agccacacacacacacac ac        a        gaa        g 
 ggc    gggc                  g  cggaucga cccguugc   ucgaacuu g
 |||    ||||                  |  |||||||| ||||||||   |||||||| u
 ccg    cccg                  C  GCCUAGCU GGGCGACG   AGCUugag u
-   ---a    --------------auac GA        -        ---        u 


Annotation confidence Not enough data
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Genome context
Unknown_group_95: 5483-5587 [+]

Database links

Mature dps-miR-2518

Accession MIMAT0012301
Description Drosophila pseudoobscura dps-miR-2518 mature miRNA
Sequence 71 - UCGAGCAGCGGGUCGAUCCGAGC - 93
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20037610
    Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
    "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
    "Nat Genet (2010) 42:6-9