miRBase entry: dps-mir-2504

Stem-loop dps-mir-2504


Accession
MI0011629
Description
Drosophila pseudoobscura dps-mir-2504 precursor miRNA


Sequence

gucucggaucugGUAAGGAUUAAGAUUAAAUGUUgauucaaaucggugucccguuuaaccucuaguucuuguucuguaca
((..((((.....(((((((((((.(((((((..(((.(......).))).))))))).)).))))))))).)))).)).

Structure
-  cu    ucugG         -  A       UU   u aa 
 gu  cgga     UAAGGAUUA AG UUAAAUG  gau c  a
 ||  ||||     ||||||||| || |||||||  ||| |   
 ca  gucu     guucuugau uc aauuugc  cug g  u
a  -u    ----u         c  c       -c   u gc 


Annotation confidence Not enough data
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Genome context
2: 23586051-23586130 [+]

Database links

Mature dps-miR-2504

Accession MIMAT0012288
Description Drosophila pseudoobscura dps-miR-2504 mature miRNA
Sequence 13 - GUAAGGAUUAAGAUUAAAUGUU - 34
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20037610
    Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
    "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
    "Nat Genet (2010) 42:6-9